Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h1Q4VGL6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rc3h1Q4VGL6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rc3h1Q4VGL6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.46■□□□□ 0.54
Rc3h1Q4VGL6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rc3h1Q4VGL6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Gm27646-201ENSMUST00000183989 110 ntBASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Gm6550-201ENSMUST00000187574 993 ntBASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h1Q4VGL6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h1Q4VGL6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h1Q4VGL6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.42■□□□□ 0.54
Rc3h1Q4VGL6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms