Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3hdm4Q4VBF2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Birc2-201ENSMUST00000054878 378 ntBASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
R3hdm4Q4VBF2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3hdm4Q4VBF2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3hdm4Q4VBF2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3hdm4Q4VBF2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3hdm4Q4VBF2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3hdm4Q4VBF2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3hdm4Q4VBF2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms