Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prpf38aQ4FK66 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Gm7222-201ENSMUST00000117512 906 ntBASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prpf38aQ4FK66 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Gm5364-201ENSMUST00000216789 889 ntBASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf38aQ4FK66 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms