Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim80Q3V061 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.58■□□□□ 0.25
Trim80Q3V061 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim80Q3V061 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Gm18032-201ENSMUST00000222541 538 ntBASIC16.58■□□□□ 0.24
Trim80Q3V061 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.58■□□□□ 0.24
Trim80Q3V061 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim80Q3V061 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim80Q3V061 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim80Q3V061 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 AA414768-201ENSMUST00000121924 1257 ntBASIC16.57■□□□□ 0.24
Trim80Q3V061 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.57■□□□□ 0.24
Trim80Q3V061 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim80Q3V061 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim80Q3V061 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim80Q3V061 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim80Q3V061 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim80Q3V061 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trim80Q3V061 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trim80Q3V061 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim80Q3V061 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Trim80Q3V061 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim80Q3V061 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Trim80Q3V061 Sybu-209ENSMUST00000228639 4113 ntBASIC16.55■□□□□ 0.24
Trim80Q3V061 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms