Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Gm44486-201ENSMUST00000198508 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm44454-201ENSMUST00000198541 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm44314-201ENSMUST00000199263 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm44394-201ENSMUST00000199558 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm44484-201ENSMUST00000199873 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm44466-201ENSMUST00000200264 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm44359-201ENSMUST00000200671 138 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.07■□□□□ 0.32
Ttc9Q3V038 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc9Q3V038 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.06■□□□□ 0.32
Ttc9Q3V038 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.06■□□□□ 0.32
Ttc9Q3V038 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.06■□□□□ 0.32
Ttc9Q3V038 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc9Q3V038 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.05■□□□□ 0.32
Ttc9Q3V038 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.05■□□□□ 0.32
Ttc9Q3V038 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.05■□□□□ 0.32
Ttc9Q3V038 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Gm15920-201ENSMUST00000118998 402 ntBASIC17.05■□□□□ 0.32
Ttc9Q3V038 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.05■□□□□ 0.32
Ttc9Q3V038 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.05■□□□□ 0.32
Ttc9Q3V038 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc9Q3V038 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ttc9Q3V038 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Rprl3-201ENSMUST00000157400 290 ntBASIC17.04■□□□□ 0.32
Ttc9Q3V038 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc9Q3V038 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.03■□□□□ 0.32
Ttc9Q3V038 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.03■□□□□ 0.32
Ttc9Q3V038 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.03■□□□□ 0.32
Ttc9Q3V038 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ttc9Q3V038 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms