Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.31■□□□□ 0.2
Cnga4Q3UW12 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cnga4Q3UW12 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.31■□□□□ 0.2
Cnga4Q3UW12 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cnga4Q3UW12 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Gm13186-201ENSMUST00000118031 316 ntBASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cnga4Q3UW12 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cnga4Q3UW12 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cnga4Q3UW12 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Gm15378-201ENSMUST00000121894 207 ntBASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cnga4Q3UW12 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cnga4Q3UW12 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cnga4Q3UW12 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms