Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Thap2-203ENSMUST00000218989 527 ntBASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Arhgef40Q3UPH7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Gm44335-201ENSMUST00000196879 141 ntBASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Gm44297-201ENSMUST00000198304 141 ntBASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Gm44346-201ENSMUST00000198851 141 ntBASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Arhgef40Q3UPH7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Arhgef40Q3UPH7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Gm13365-201ENSMUST00000121188 973 ntBASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Arhgef40Q3UPH7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Gm6226-201ENSMUST00000117765 1146 ntBASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Arhgef40Q3UPH7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Arhgef40Q3UPH7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC23.33■■□□□ 1.33
Arhgef40Q3UPH7 Gm5184-201ENSMUST00000220417 1702 ntBASIC23.33■■□□□ 1.33
Arhgef40Q3UPH7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Arhgef40Q3UPH7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Arhgef40Q3UPH7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Arhgef40Q3UPH7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Arhgef40Q3UPH7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Arhgef40Q3UPH7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Arhgef40Q3UPH7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC23.33■■□□□ 1.32
Arhgef40Q3UPH7 Gm42900-201ENSMUST00000197184 2167 ntBASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Rpph1-201ENSMUST00000175096 319 ntBASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Arhgef40Q3UPH7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC23.31■■□□□ 1.32
Arhgef40Q3UPH7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms