Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upf3aQ3ULJ3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Gm15358-201ENSMUST00000119249 520 ntBASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upf3aQ3ULJ3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gm26308-201ENSMUST00000157768 69 ntBASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gm4899-201ENSMUST00000178708 719 ntBASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gm27300-201ENSMUST00000184085 97 ntBASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gm27335-201ENSMUST00000184758 97 ntBASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.78■□□□□ 0.28
Upf3aQ3ULJ3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upf3aQ3ULJ3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Upf3aQ3ULJ3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upf3aQ3ULJ3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.77■□□□□ 0.27
Upf3aQ3ULJ3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Upf3aQ3ULJ3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.77■□□□□ 0.27
Upf3aQ3ULJ3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upf3aQ3ULJ3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf3aQ3ULJ3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms