Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.71□□□□□ -0.06
Spg11Q3UHA3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.06
Spg11Q3UHA3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Spg11Q3UHA3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Spg11Q3UHA3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.71□□□□□ -0.06
Spg11Q3UHA3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Gm6888-201ENSMUST00000221983 706 ntBASIC14.7□□□□□ -0.06
Spg11Q3UHA3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Spg11Q3UHA3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.69□□□□□ -0.06
Spg11Q3UHA3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Spg11Q3UHA3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg11Q3UHA3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Gm9063-201ENSMUST00000223299 582 ntBASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Gm2810-201ENSMUST00000118681 990 ntBASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Spg11Q3UHA3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms