Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Gm18421-201ENSMUST00000204122 625 ntBASIC17.02■□□□□ 0.32
Trim43aQ3TL54 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim43aQ3TL54 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim43aQ3TL54 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Gm11539-201ENSMUST00000119837 557 ntBASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43aQ3TL54 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Gm27463-201ENSMUST00000183569 57 ntBASIC17■□□□□ 0.31
Trim43aQ3TL54 Gm7977-201ENSMUST00000193787 748 ntBASIC17■□□□□ 0.31
Trim43aQ3TL54 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Trim43aQ3TL54 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43aQ3TL54 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43aQ3TL54 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms