Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Gm21559-201ENSMUST00000220638 855 ntBASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Gm8587-201ENSMUST00000076538 843 ntBASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cul4aQ3TCH7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.82■□□□□ 0.28
Cul4aQ3TCH7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cul4aQ3TCH7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cul4aQ3TCH7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Gm10052-201ENSMUST00000168019 960 ntBASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Gm7729-201ENSMUST00000050143 801 ntBASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cul4aQ3TCH7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms