Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Asic1-205ENSMUST00000228185 1818 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm15678-201ENSMUST00000117573 960 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm12008-201ENSMUST00000117791 755 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm4875-201ENSMUST00000118257 786 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Mir6404-201ENSMUST00000183699 94 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm13410-201ENSMUST00000117058 1415 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Mir5132-201ENSMUST00000175166 71 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Tfap2a-209ENSMUST00000225180 1828 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm43068-201ENSMUST00000201095 1273 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm18222-201ENSMUST00000202416 1387 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm8344-201ENSMUST00000119813 856 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm6539-201ENSMUST00000119157 1064 ntBASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC8.47□□□□□ -1.05
Ush2AQ2QI47 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Gm11620-201ENSMUST00000118770 1845 ntBASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Ush2AQ2QI47 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm38225-201ENSMUST00000194001 393 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm7067-201ENSMUST00000207698 1249 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm20445-201ENSMUST00000061905 565 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Hsf1-204ENSMUST00000226872 2104 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Gm7584-201ENSMUST00000175829 940 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 AC151836.1-202ENSMUST00000226259 753 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Ush2AQ2QI47 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms