Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Thumpd3P97770 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Thumpd3P97770 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd3P97770 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Thumpd3P97770 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Thumpd3P97770 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.33■□□□□ 0.2
Thumpd3P97770 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Prob1-201ENSMUST00000097619 3021 ntBASIC16.33■□□□□ 0.2
Thumpd3P97770 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Thumpd3P97770 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd3P97770 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Thumpd3P97770 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Thumpd3P97770 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.32■□□□□ 0.2
Thumpd3P97770 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.32■□□□□ 0.2
Thumpd3P97770 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Thumpd3P97770 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.32■□□□□ 0.2
Thumpd3P97770 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.32■□□□□ 0.2
Thumpd3P97770 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Thumpd3P97770 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd3P97770 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Thumpd3P97770 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Thumpd3P97770 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.31■□□□□ 0.2
Thumpd3P97770 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Gm27389-201ENSMUST00000183622 195 ntBASIC16.31■□□□□ 0.2
Thumpd3P97770 Gm33142-201ENSMUST00000193913 867 ntBASIC16.31■□□□□ 0.2
Thumpd3P97770 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Thumpd3P97770 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd3P97770 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Thumpd3P97770 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.31■□□□□ 0.2
Thumpd3P97770 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Thumpd3P97770 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Thumpd3P97770 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Thumpd3P97770 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Gm7370-201ENSMUST00000219471 767 ntBASIC16.3■□□□□ 0.2
Thumpd3P97770 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Thumpd3P97770 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd3P97770 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms