Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.97■□□□□ 0.79
Smarcc1P97496 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.97■□□□□ 0.79
Smarcc1P97496 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smarcc1P97496 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Smarcc1P97496 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcc1P97496 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Gm9682-201ENSMUST00000197505 556 ntBASIC19.96■□□□□ 0.79
Smarcc1P97496 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smarcc1P97496 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc1P97496 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.95■□□□□ 0.79
Smarcc1P97496 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Smarcc1P97496 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Smarcc1P97496 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Smarcc1P97496 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Smarcc1P97496 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.95■□□□□ 0.78
Smarcc1P97496 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Smarcc1P97496 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.95■□□□□ 0.78
Smarcc1P97496 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smarcc1P97496 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smarcc1P97496 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc1P97496 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.94■□□□□ 0.78
Smarcc1P97496 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.94■□□□□ 0.78
Smarcc1P97496 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.94■□□□□ 0.78
Smarcc1P97496 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.94■□□□□ 0.78
Smarcc1P97496 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Smarcc1P97496 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarcc1P97496 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarcc1P97496 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc1P97496 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smarcc1P97496 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarcc1P97496 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smarcc1P97496 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.93■□□□□ 0.78
Smarcc1P97496 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.93■□□□□ 0.78
Smarcc1P97496 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.93■□□□□ 0.78
Smarcc1P97496 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.93■□□□□ 0.78
Smarcc1P97496 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc1P97496 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.93■□□□□ 0.78
Smarcc1P97496 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc1P97496 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc1P97496 AA543401-201ENSMUST00000164248 1269 ntBASIC19.92■□□□□ 0.78
Smarcc1P97496 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.92■□□□□ 0.78
Smarcc1P97496 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc1P97496 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc1P97496 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc1P97496 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc1P97496 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms