Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm11425-201ENSMUST00000119608 498 ntBASIC10.88□□□□□ -0.67
PrkdcP97313 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.88□□□□□ -0.67
PrkdcP97313 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm45668-201ENSMUST00000211271 493 ntBASIC10.88□□□□□ -0.67
PrkdcP97313 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.88□□□□□ -0.67
PrkdcP97313 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PrkdcP97313 Gm9396-201ENSMUST00000076703 567 ntBASIC10.88□□□□□ -0.67
PrkdcP97313 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
PrkdcP97313 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
PrkdcP97313 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Gm12859-201ENSMUST00000117834 427 ntBASIC10.87□□□□□ -0.67
PrkdcP97313 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
PrkdcP97313 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
PrkdcP97313 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Gm19164-201ENSMUST00000210667 640 ntBASIC10.87□□□□□ -0.67
PrkdcP97313 Gm43182-201ENSMUST00000199476 2528 ntBASIC10.87□□□□□ -0.67
PrkdcP97313 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC10.87□□□□□ -0.67
PrkdcP97313 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
PrkdcP97313 Gm28631-201ENSMUST00000190740 334 ntBASIC10.86□□□□□ -0.67
PrkdcP97313 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PrkdcP97313 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Gm8410-201ENSMUST00000117225 605 ntBASIC10.86□□□□□ -0.67
PrkdcP97313 Gm14042-201ENSMUST00000120139 833 ntBASIC10.86□□□□□ -0.67
PrkdcP97313 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Gm6415-201ENSMUST00000118488 348 ntBASIC10.86□□□□□ -0.67
PrkdcP97313 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.86□□□□□ -0.67
PrkdcP97313 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
PrkdcP97313 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.86□□□□□ -0.67
PrkdcP97313 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.86□□□□□ -0.67
PrkdcP97313 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
PrkdcP97313 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
PrkdcP97313 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PrkdcP97313 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PrkdcP97313 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PrkdcP97313 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
PrkdcP97313 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Mir1247-201ENSMUST00000116706 82 ntBASIC10.85□□□□□ -0.67
PrkdcP97313 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.85□□□□□ -0.67
PrkdcP97313 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
PrkdcP97313 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.85□□□□□ -0.67
PrkdcP97313 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
PrkdcP97313 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.85□□□□□ -0.67
PrkdcP97313 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PrkdcP97313 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms