Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcaP82350 App-207ENSMUST00000227737 2827 ntBASIC13.46□□□□□ -0.25
SgcaP82350 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcaP82350 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
SgcaP82350 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcaP82350 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
SgcaP82350 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SgcaP82350 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.46□□□□□ -0.26
SgcaP82350 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.45□□□□□ -0.26
SgcaP82350 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.45□□□□□ -0.26
SgcaP82350 Gm37292-201ENSMUST00000192062 758 ntBASIC13.45□□□□□ -0.26
SgcaP82350 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SgcaP82350 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SgcaP82350 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
SgcaP82350 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SgcaP82350 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcaP82350 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
SgcaP82350 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.44□□□□□ -0.26
SgcaP82350 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
SgcaP82350 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SgcaP82350 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcaP82350 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.44□□□□□ -0.26
SgcaP82350 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.43□□□□□ -0.26
SgcaP82350 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.43□□□□□ -0.26
SgcaP82350 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SgcaP82350 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.43□□□□□ -0.26
SgcaP82350 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.43□□□□□ -0.26
SgcaP82350 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.43□□□□□ -0.26
SgcaP82350 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SgcaP82350 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms