Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.31■□□□□ 0.36
CiitaP79621 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CiitaP79621 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CiitaP79621 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.31■□□□□ 0.36
CiitaP79621 Gm12350-201ENSMUST00000121208 462 ntBASIC17.31■□□□□ 0.36
CiitaP79621 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CiitaP79621 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.31■□□□□ 0.36
CiitaP79621 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.31■□□□□ 0.36
CiitaP79621 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CiitaP79621 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CiitaP79621 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.3■□□□□ 0.36
CiitaP79621 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.3■□□□□ 0.36
CiitaP79621 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.3■□□□□ 0.36
CiitaP79621 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.3■□□□□ 0.36
CiitaP79621 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.3■□□□□ 0.36
CiitaP79621 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CiitaP79621 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CiitaP79621 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CiitaP79621 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CiitaP79621 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CiitaP79621 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CiitaP79621 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 AW822252-206ENSMUST00000208904 237 ntBASIC17.29■□□□□ 0.36
CiitaP79621 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.29■□□□□ 0.36
CiitaP79621 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.29■□□□□ 0.36
CiitaP79621 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.29■□□□□ 0.36
CiitaP79621 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.29■□□□□ 0.36
CiitaP79621 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CiitaP79621 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CiitaP79621 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CiitaP79621 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CiitaP79621 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CiitaP79621 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CiitaP79621 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.28■□□□□ 0.36
CiitaP79621 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CiitaP79621 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CiitaP79621 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.28■□□□□ 0.36
CiitaP79621 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.28■□□□□ 0.36
CiitaP79621 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms