Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Ufd1P70362 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ufd1P70362 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.78□□□□□ -0.2
Ufd1P70362 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.78□□□□□ -0.2
Ufd1P70362 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.78□□□□□ -0.2
Ufd1P70362 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.78□□□□□ -0.2
Ufd1P70362 Gm37025-201ENSMUST00000195159 829 ntBASIC13.78□□□□□ -0.2
Ufd1P70362 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Ufd1P70362 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ufd1P70362 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ufd1P70362 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Ufd1P70362 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Ufd1P70362 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.77□□□□□ -0.2
Ufd1P70362 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ufd1P70362 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Ufd1P70362 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ufd1P70362 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ufd1P70362 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.77□□□□□ -0.21
Ufd1P70362 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.77□□□□□ -0.21
Ufd1P70362 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Ufd1P70362 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ufd1P70362 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ufd1P70362 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ufd1P70362 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.76□□□□□ -0.21
Ufd1P70362 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ufd1P70362 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.76□□□□□ -0.21
Ufd1P70362 Gm2559-201ENSMUST00000201323 363 ntBASIC13.76□□□□□ -0.21
Ufd1P70362 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.76□□□□□ -0.21
Ufd1P70362 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ufd1P70362 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.76□□□□□ -0.21
Ufd1P70362 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms