Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim4P70271 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim4P70271 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Gm21362-201ENSMUST00000194272 928 ntBASIC13.33□□□□□ -0.28
Pdlim4P70271 Gm44430-201ENSMUST00000203376 995 ntBASIC13.33□□□□□ -0.28
Pdlim4P70271 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.33□□□□□ -0.28
Pdlim4P70271 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim4P70271 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim4P70271 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.33□□□□□ -0.28
Pdlim4P70271 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim4P70271 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim4P70271 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.32□□□□□ -0.28
Pdlim4P70271 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim4P70271 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim4P70271 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Gm27742-201ENSMUST00000184667 60 ntBASIC13.31□□□□□ -0.28
Pdlim4P70271 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pdlim4P70271 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim4P70271 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.3□□□□□ -0.28
Pdlim4P70271 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.3□□□□□ -0.28
Pdlim4P70271 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pdlim4P70271 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.3□□□□□ -0.28
Pdlim4P70271 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms