Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Six5P70178 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Gm14859-201ENSMUST00000117752 357 ntBASIC14.99□□□□□ -0.01
Six5P70178 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.99□□□□□ -0.01
Six5P70178 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.99□□□□□ -0.01
Six5P70178 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.99□□□□□ -0.01
Six5P70178 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.99□□□□□ -0.01
Six5P70178 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.99□□□□□ -0.01
Six5P70178 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Six5P70178 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Six5P70178 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Six5P70178 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.98□□□□□ -0.01
Six5P70178 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.98□□□□□ -0.01
Six5P70178 Mir3081-201ENSMUST00000175305 84 ntBASIC14.98□□□□□ -0.01
Six5P70178 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.98□□□□□ -0.01
Six5P70178 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.98□□□□□ -0.01
Six5P70178 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Six5P70178 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Six5P70178 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Six5P70178 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Six5P70178 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.97□□□□□ -0.01
Six5P70178 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Six5P70178 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.97□□□□□ -0.01
Six5P70178 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.97□□□□□ -0.01
Six5P70178 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.97□□□□□ -0.01
Six5P70178 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.97□□□□□ -0.01
Six5P70178 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.97□□□□□ -0.01
Six5P70178 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Six5P70178 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Six5P70178 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Six5P70178 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Six5P70178 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Six5P70178 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.96□□□□□ -0.01
Six5P70178 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Six5P70178 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms