Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Gabra1P62812 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.52□□□□□ -0.24
Gabra1P62812 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gabra1P62812 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gabra1P62812 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Gabra1P62812 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.52□□□□□ -0.25
Gabra1P62812 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.52□□□□□ -0.25
Gabra1P62812 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabra1P62812 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Gabra1P62812 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabra1P62812 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabra1P62812 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.51□□□□□ -0.25
Gabra1P62812 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.51□□□□□ -0.25
Gabra1P62812 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Gabra1P62812 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Gabra1P62812 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gabra1P62812 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Gm11249-201ENSMUST00000117071 859 ntBASIC13.51□□□□□ -0.25
Gabra1P62812 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.51□□□□□ -0.25
Gabra1P62812 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gabra1P62812 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.51□□□□□ -0.25
Gabra1P62812 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Gabra1P62812 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.51□□□□□ -0.25
Gabra1P62812 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.51□□□□□ -0.25
Gabra1P62812 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Gabra1P62812 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gabra1P62812 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Gabra1P62812 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Gm12382-201ENSMUST00000122005 922 ntBASIC13.5□□□□□ -0.25
Gabra1P62812 Gm13158-201ENSMUST00000122007 736 ntBASIC13.5□□□□□ -0.25
Gabra1P62812 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Gm26571-201ENSMUST00000181399 666 ntBASIC13.5□□□□□ -0.25
Gabra1P62812 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.5□□□□□ -0.25
Gabra1P62812 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.5□□□□□ -0.25
Gabra1P62812 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gabra1P62812 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms