Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm17808-201ENSMUST00000200859 894 ntBASIC14.06□□□□□ -0.16
Lsm6P62313 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lsm6P62313 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lsm6P62313 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm6P62313 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm6P62313 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lsm6P62313 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.06□□□□□ -0.16
Lsm6P62313 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Lsm6P62313 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm6P62313 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Lsm6P62313 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lsm6P62313 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lsm6P62313 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm6P62313 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Lsm6P62313 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm6P62313 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lsm6P62313 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Lsm6P62313 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lsm6P62313 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm6P62313 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lsm6P62313 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Mir6404-201ENSMUST00000183699 94 ntBASIC14.03□□□□□ -0.16
Lsm6P62313 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm6P62313 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lsm6P62313 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.03□□□□□ -0.16
Lsm6P62313 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm6P62313 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm6P62313 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Lsm6P62313 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Lsm6P62313 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms