Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.45□□□□□ -0.58
Cks1bP61025 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.44□□□□□ -0.58
Cks1bP61025 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.44□□□□□ -0.58
Cks1bP61025 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.44□□□□□ -0.58
Cks1bP61025 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1bP61025 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Cks1bP61025 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.44□□□□□ -0.58
Cks1bP61025 Mir5133-201ENSMUST00000174955 77 ntBASIC11.44□□□□□ -0.58
Cks1bP61025 Gm5408-201ENSMUST00000197998 747 ntBASIC11.44□□□□□ -0.58
Cks1bP61025 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cks1bP61025 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.44□□□□□ -0.58
Cks1bP61025 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1bP61025 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cks1bP61025 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Cks1bP61025 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1bP61025 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.43□□□□□ -0.58
Cks1bP61025 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cks1bP61025 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.43□□□□□ -0.58
Cks1bP61025 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Gm10138-203ENSMUST00000206952 366 ntBASIC11.43□□□□□ -0.58
Cks1bP61025 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cks1bP61025 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cks1bP61025 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.43□□□□□ -0.58
Cks1bP61025 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.43□□□□□ -0.58
Cks1bP61025 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cks1bP61025 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1bP61025 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Cks1bP61025 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.42□□□□□ -0.58
Cks1bP61025 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cks1bP61025 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.42□□□□□ -0.58
Cks1bP61025 Gm6576-201ENSMUST00000169678 883 ntBASIC11.42□□□□□ -0.58
Cks1bP61025 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.42□□□□□ -0.58
Cks1bP61025 Gm4968-201ENSMUST00000071458 858 ntBASIC11.42□□□□□ -0.58
Cks1bP61025 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.42□□□□□ -0.58
Cks1bP61025 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms