Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.33□□□□□ -0.11
Cldn18P56857 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.33□□□□□ -0.12
Cldn18P56857 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.33□□□□□ -0.12
Cldn18P56857 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn18P56857 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cldn18P56857 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cldn18P56857 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn18P56857 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn18P56857 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn18P56857 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cldn18P56857 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn18P56857 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cldn18P56857 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cldn18P56857 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn18P56857 Gm25745-201ENSMUST00000174945 133 ntBASIC14.32□□□□□ -0.12
Cldn18P56857 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.32□□□□□ -0.12
Cldn18P56857 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn18P56857 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn18P56857 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn18P56857 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.31□□□□□ -0.12
Cldn18P56857 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn18P56857 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn18P56857 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.31□□□□□ -0.12
Cldn18P56857 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn18P56857 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cldn18P56857 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.31□□□□□ -0.12
Cldn18P56857 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cldn18P56857 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn18P56857 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cldn18P56857 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.31□□□□□ -0.12
Cldn18P56857 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn18P56857 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn18P56857 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms