Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nub1P54729 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Nub1P54729 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Nub1P54729 Gm13312-201ENSMUST00000119631 718 ntBASIC17.22■□□□□ 0.35
Nub1P54729 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.22■□□□□ 0.35
Nub1P54729 Gm27357-201ENSMUST00000183754 135 ntBASIC17.22■□□□□ 0.35
Nub1P54729 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.22■□□□□ 0.35
Nub1P54729 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nub1P54729 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nub1P54729 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Nub1P54729 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Nub1P54729 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nub1P54729 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.21■□□□□ 0.35
Nub1P54729 Mir3081-201ENSMUST00000175305 84 ntBASIC17.21■□□□□ 0.35
Nub1P54729 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.21■□□□□ 0.35
Nub1P54729 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nub1P54729 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nub1P54729 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.21■□□□□ 0.35
Nub1P54729 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nub1P54729 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Nub1P54729 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.2■□□□□ 0.34
Nub1P54729 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Nub1P54729 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.2■□□□□ 0.34
Nub1P54729 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nub1P54729 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.2■□□□□ 0.34
Nub1P54729 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nub1P54729 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.2■□□□□ 0.34
Nub1P54729 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.2■□□□□ 0.34
Nub1P54729 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Nub1P54729 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.2■□□□□ 0.34
Nub1P54729 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nub1P54729 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nub1P54729 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.19■□□□□ 0.34
Nub1P54729 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.19■□□□□ 0.34
Nub1P54729 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nub1P54729 Gm17807-201ENSMUST00000186869 298 ntBASIC17.19■□□□□ 0.34
Nub1P54729 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms