Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sox3P53784 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sox3P53784 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sox3P53784 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.31■□□□□ 0.04
Sox3P53784 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox3P53784 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox3P53784 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox3P53784 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sox3P53784 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.3■□□□□ 0.04
Sox3P53784 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Sox3P53784 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox3P53784 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox3P53784 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Sox3P53784 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Gm44357-201ENSMUST00000195897 142 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm19658-201ENSMUST00000196231 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44367-201ENSMUST00000196836 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44350-201ENSMUST00000197197 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44390-201ENSMUST00000197533 144 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44313-201ENSMUST00000198018 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44486-201ENSMUST00000198508 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44454-201ENSMUST00000198541 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44314-201ENSMUST00000199263 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44394-201ENSMUST00000199558 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44484-201ENSMUST00000199873 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44466-201ENSMUST00000200264 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm44359-201ENSMUST00000200671 138 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox3P53784 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.29■□□□□ 0.04
Sox3P53784 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Sox3P53784 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox3P53784 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox3P53784 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox3P53784 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox3P53784 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms