Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Lhx3P50481 Gm13884-201ENSMUST00000118103 829 ntBASIC16.22■□□□□ 0.19
Lhx3P50481 Mir8098-201ENSMUST00000184011 137 ntBASIC16.22■□□□□ 0.19
Lhx3P50481 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.22■□□□□ 0.19
Lhx3P50481 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lhx3P50481 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.22■□□□□ 0.19
Lhx3P50481 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.22■□□□□ 0.19
Lhx3P50481 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.22■□□□□ 0.19
Lhx3P50481 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.21■□□□□ 0.19
Lhx3P50481 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lhx3P50481 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Gm8655-201ENSMUST00000221159 852 ntBASIC16.21■□□□□ 0.19
Lhx3P50481 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Rps4l-201ENSMUST00000071745 943 ntBASIC16.21■□□□□ 0.19
Lhx3P50481 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Lhx3P50481 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx3P50481 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lhx3P50481 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lhx3P50481 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lhx3P50481 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lhx3P50481 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Gm11452-201ENSMUST00000122376 690 ntBASIC16.2■□□□□ 0.18
Lhx3P50481 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.2■□□□□ 0.18
Lhx3P50481 Gm28659-201ENSMUST00000188013 759 ntBASIC16.2■□□□□ 0.18
Lhx3P50481 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.2■□□□□ 0.18
Lhx3P50481 Gm18622-201ENSMUST00000219361 595 ntBASIC16.2■□□□□ 0.18
Lhx3P50481 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.2■□□□□ 0.18
Lhx3P50481 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lhx3P50481 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.2■□□□□ 0.18
Lhx3P50481 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx3P50481 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.19■□□□□ 0.18
Lhx3P50481 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.19■□□□□ 0.18
Lhx3P50481 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lhx3P50481 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lhx3P50481 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.19■□□□□ 0.18
Lhx3P50481 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.19■□□□□ 0.18
Lhx3P50481 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Gm7461-201ENSMUST00000058918 827 ntBASIC16.19■□□□□ 0.18
Lhx3P50481 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.19■□□□□ 0.18
Lhx3P50481 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx3P50481 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Lhx3P50481 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm4535-201ENSMUST00000182274 558 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.18■□□□□ 0.18
Lhx3P50481 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms