Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SftpbP50405 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SftpbP50405 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SftpbP50405 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.43■□□□□ 0.22
SftpbP50405 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SftpbP50405 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SftpbP50405 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SftpbP50405 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SftpbP50405 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.42■□□□□ 0.22
SftpbP50405 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SftpbP50405 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.42■□□□□ 0.22
SftpbP50405 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SftpbP50405 Gm36967-201ENSMUST00000193814 266 ntBASIC16.42■□□□□ 0.22
SftpbP50405 Gm29707-201ENSMUST00000196325 491 ntBASIC16.42■□□□□ 0.22
SftpbP50405 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SftpbP50405 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.41■□□□□ 0.22
SftpbP50405 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.41■□□□□ 0.22
SftpbP50405 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SftpbP50405 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.41■□□□□ 0.22
SftpbP50405 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Gm13559-201ENSMUST00000120476 863 ntBASIC16.41■□□□□ 0.22
SftpbP50405 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.41■□□□□ 0.22
SftpbP50405 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.41■□□□□ 0.22
SftpbP50405 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.41■□□□□ 0.22
SftpbP50405 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.41■□□□□ 0.22
SftpbP50405 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SftpbP50405 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SftpbP50405 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.41■□□□□ 0.22
SftpbP50405 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SftpbP50405 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SftpbP50405 Sybu-209ENSMUST00000228639 4113 ntBASIC16.4■□□□□ 0.22
SftpbP50405 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.4■□□□□ 0.22
SftpbP50405 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SftpbP50405 Gm26039-201ENSMUST00000158152 144 ntBASIC16.4■□□□□ 0.22
SftpbP50405 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SftpbP50405 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SftpbP50405 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SftpbP50405 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SftpbP50405 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.39■□□□□ 0.22
SftpbP50405 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SftpbP50405 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SftpbP50405 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SftpbP50405 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.39■□□□□ 0.21
SftpbP50405 Mir5130-201ENSMUST00000175160 84 ntBASIC16.39■□□□□ 0.21
SftpbP50405 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.39■□□□□ 0.21
SftpbP50405 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.39■□□□□ 0.21
SftpbP50405 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.39■□□□□ 0.21
SftpbP50405 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.39■□□□□ 0.21
SftpbP50405 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SftpbP50405 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms