Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.98■□□□□ 0.63
Ercc3P49135 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.98■□□□□ 0.63
Ercc3P49135 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.98■□□□□ 0.63
Ercc3P49135 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ercc3P49135 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Ercc3P49135 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.98■□□□□ 0.63
Ercc3P49135 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.97■□□□□ 0.63
Ercc3P49135 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.97■□□□□ 0.63
Ercc3P49135 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ercc3P49135 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ercc3P49135 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.97■□□□□ 0.63
Ercc3P49135 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ercc3P49135 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.97■□□□□ 0.63
Ercc3P49135 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ercc3P49135 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc3P49135 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
Ercc3P49135 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Ercc3P49135 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Ercc3P49135 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Gm24589-201ENSMUST00000116692 94 ntBASIC18.96■□□□□ 0.63
Ercc3P49135 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ercc3P49135 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.96■□□□□ 0.63
Ercc3P49135 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.96■□□□□ 0.63
Ercc3P49135 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ercc3P49135 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Ercc3P49135 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc3P49135 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Gm27741-201ENSMUST00000185060 237 ntBASIC18.95■□□□□ 0.62
Ercc3P49135 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.95■□□□□ 0.62
Ercc3P49135 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.95■□□□□ 0.62
Ercc3P49135 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
Ercc3P49135 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc3P49135 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ercc3P49135 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ercc3P49135 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc3P49135 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms