Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Gm18889-201ENSMUST00000174284 929 ntBASIC17.87■□□□□ 0.45
Brca1P48754 Mir6977-201ENSMUST00000184960 64 ntBASIC17.87■□□□□ 0.45
Brca1P48754 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Brca1P48754 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.87■□□□□ 0.45
Brca1P48754 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Brca1P48754 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.87■□□□□ 0.45
Brca1P48754 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Brca1P48754 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Brca1P48754 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.86■□□□□ 0.45
Brca1P48754 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Brca1P48754 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Brca1P48754 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.86■□□□□ 0.45
Brca1P48754 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Brca1P48754 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Brca1P48754 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.86■□□□□ 0.45
Brca1P48754 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brca1P48754 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brca1P48754 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.85■□□□□ 0.45
Brca1P48754 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.85■□□□□ 0.45
Brca1P48754 Gm22175-201ENSMUST00000175007 78 ntBASIC17.85■□□□□ 0.45
Brca1P48754 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brca1P48754 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brca1P48754 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brca1P48754 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.85■□□□□ 0.45
Brca1P48754 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brca1P48754 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Brca1P48754 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Brca1P48754 Rpph1-201ENSMUST00000175096 319 ntBASIC17.84■□□□□ 0.45
Brca1P48754 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.84■□□□□ 0.45
Brca1P48754 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Brca1P48754 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.84■□□□□ 0.45
Brca1P48754 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.84■□□□□ 0.45
Brca1P48754 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brca1P48754 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Brca1P48754 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.83■□□□□ 0.45
Brca1P48754 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Brca1P48754 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Brca1P48754 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Brca1P48754 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Brca1P48754 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Brca1P48754 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Brca1P48754 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Brca1P48754 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.83■□□□□ 0.44
Brca1P48754 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.83■□□□□ 0.44
Brca1P48754 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Brca1P48754 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Brca1P48754 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.83■□□□□ 0.44
Brca1P48754 Gm10253-201ENSMUST00000194270 940 ntBASIC17.83■□□□□ 0.44
Brca1P48754 Gm7774-201ENSMUST00000200064 533 ntBASIC17.83■□□□□ 0.44
Brca1P48754 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.83■□□□□ 0.44
Brca1P48754 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Brca1P48754 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Brca1P48754 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Brca1P48754 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.82■□□□□ 0.44
Brca1P48754 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Brca1P48754 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Brca1P48754 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Brca1P48754 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms