Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfx3P48381 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Prob1-201ENSMUST00000097619 3021 ntBASIC14.49□□□□□ -0.09
Rfx3P48381 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rfx3P48381 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rfx3P48381 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.49□□□□□ -0.09
Rfx3P48381 Gm11336-201ENSMUST00000118168 334 ntBASIC14.49□□□□□ -0.09
Rfx3P48381 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.49□□□□□ -0.09
Rfx3P48381 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.49□□□□□ -0.09
Rfx3P48381 Gm44450-201ENSMUST00000199528 114 ntBASIC14.49□□□□□ -0.09
Rfx3P48381 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Rfx3P48381 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Gm10566-201ENSMUST00000086739 996 ntBASIC14.49□□□□□ -0.09
Rfx3P48381 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.49□□□□□ -0.09
Rfx3P48381 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx3P48381 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Rfx3P48381 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfx3P48381 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Gm26039-201ENSMUST00000158152 144 ntBASIC14.48□□□□□ -0.09
Rfx3P48381 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rfx3P48381 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx3P48381 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfx3P48381 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rfx3P48381 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx3P48381 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.48□□□□□ -0.09
Rfx3P48381 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfx3P48381 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx3P48381 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Rfx3P48381 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.47□□□□□ -0.09
Rfx3P48381 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.47□□□□□ -0.09
Rfx3P48381 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Gm18421-201ENSMUST00000204122 625 ntBASIC14.47□□□□□ -0.09
Rfx3P48381 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.47□□□□□ -0.09
Rfx3P48381 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rfx3P48381 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rfx3P48381 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx3P48381 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfx3P48381 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.47□□□□□ -0.09
Rfx3P48381 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfx3P48381 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rfx3P48381 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx3P48381 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx3P48381 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx3P48381 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms