Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gdf6P43028 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gdf6P43028 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gdf6P43028 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Gdf6P43028 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gdf6P43028 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gdf6P43028 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Gdf6P43028 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Gm7222-201ENSMUST00000117512 906 ntBASIC16.79■□□□□ 0.28
Gdf6P43028 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.79■□□□□ 0.28
Gdf6P43028 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.79■□□□□ 0.28
Gdf6P43028 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.79■□□□□ 0.28
Gdf6P43028 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.79■□□□□ 0.28
Gdf6P43028 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.79■□□□□ 0.28
Gdf6P43028 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.79■□□□□ 0.28
Gdf6P43028 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gdf6P43028 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gdf6P43028 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gdf6P43028 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Gdf6P43028 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm13036-201ENSMUST00000117799 748 ntBASIC16.78■□□□□ 0.28
Gdf6P43028 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.78■□□□□ 0.28
Gdf6P43028 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.78■□□□□ 0.28
Gdf6P43028 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.78■□□□□ 0.28
Gdf6P43028 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gdf6P43028 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gdf6P43028 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gdf6P43028 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gdf6P43028 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gdf6P43028 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gdf6P43028 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gdf6P43028 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Gdf6P43028 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gdf6P43028 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Gdf6P43028 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Gdf6P43028 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.77■□□□□ 0.28
Gdf6P43028 Gm27628-201ENSMUST00000184911 107 ntBASIC16.77■□□□□ 0.28
Gdf6P43028 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.77■□□□□ 0.28
Gdf6P43028 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.77■□□□□ 0.28
Gdf6P43028 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.77■□□□□ 0.28
Gdf6P43028 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Gdf6P43028 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gdf6P43028 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.76■□□□□ 0.27
Gdf6P43028 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gdf6P43028 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Gdf6P43028 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.76■□□□□ 0.27
Gdf6P43028 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.76■□□□□ 0.27
Gdf6P43028 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.76■□□□□ 0.27
Gdf6P43028 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.76■□□□□ 0.27
Gdf6P43028 Psmb5-202ENSMUST00000227257 622 ntBASIC16.76■□□□□ 0.27
Gdf6P43028 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gdf6P43028 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms