Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh4P39038 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh4P39038 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh4P39038 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cdh4P39038 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh4P39038 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdh4P39038 Dancr-204ENSMUST00000132389 2347 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdh4P39038 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdh4P39038 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdh4P39038 Gm44454-201ENSMUST00000198541 138 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdh4P39038 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.31■□□□□ 0.04
Cdh4P39038 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
Cdh4P39038 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Cdh4P39038 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdh4P39038 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh4P39038 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdh4P39038 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh4P39038 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh4P39038 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh4P39038 Gm15372-201ENSMUST00000120729 834 ntBASIC15.3■□□□□ 0.04
Cdh4P39038 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdh4P39038 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Cdh4P39038 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Cdh4P39038 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Cdh4P39038 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdh4P39038 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh4P39038 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh4P39038 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh4P39038 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cdh4P39038 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh4P39038 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdh4P39038 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdh4P39038 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh4P39038 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh4P39038 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh4P39038 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms