Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Sox5P35710 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox5P35710 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox5P35710 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sox5P35710 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.5■□□□□ 0.39
Sox5P35710 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.5■□□□□ 0.39
Sox5P35710 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Sox5P35710 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.5■□□□□ 0.39
Sox5P35710 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.5■□□□□ 0.39
Sox5P35710 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.5■□□□□ 0.39
Sox5P35710 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.5■□□□□ 0.39
Sox5P35710 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.5■□□□□ 0.39
Sox5P35710 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sox5P35710 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox5P35710 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Sox5P35710 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sox5P35710 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.49■□□□□ 0.39
Sox5P35710 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox5P35710 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.49■□□□□ 0.39
Sox5P35710 Gm27011-201ENSMUST00000182352 972 ntBASIC17.49■□□□□ 0.39
Sox5P35710 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.49■□□□□ 0.39
Sox5P35710 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Sox5P35710 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox5P35710 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sox5P35710 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox5P35710 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox5P35710 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Sox5P35710 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox5P35710 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sox5P35710 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox5P35710 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Sox5P35710 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Sox5P35710 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.48■□□□□ 0.39
Sox5P35710 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.48■□□□□ 0.39
Sox5P35710 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.48■□□□□ 0.39
Sox5P35710 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Sox5P35710 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox5P35710 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sox5P35710 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox5P35710 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox5P35710 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox5P35710 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms