Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mmp13P33435 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Mmp13P33435 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mmp13P33435 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp13P33435 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Gm11355-201ENSMUST00000121120 306 ntBASIC16.41■□□□□ 0.22
Mmp13P33435 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp13P33435 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.41■□□□□ 0.22
Mmp13P33435 Gm18115-201ENSMUST00000221209 621 ntBASIC16.41■□□□□ 0.22
Mmp13P33435 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.41■□□□□ 0.22
Mmp13P33435 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp13P33435 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp13P33435 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.4■□□□□ 0.22
Mmp13P33435 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp13P33435 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp13P33435 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Mmp13P33435 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Gm44450-201ENSMUST00000199528 114 ntBASIC16.4■□□□□ 0.22
Mmp13P33435 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Mmp13P33435 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Mmp13P33435 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Mmp13P33435 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp13P33435 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp13P33435 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mmp13P33435 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 App-207ENSMUST00000227737 2827 ntBASIC16.39■□□□□ 0.21
Mmp13P33435 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Gm9013-201ENSMUST00000132939 882 ntBASIC16.39■□□□□ 0.21
Mmp13P33435 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Mmp13P33435 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.39■□□□□ 0.21
Mmp13P33435 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.39■□□□□ 0.21
Mmp13P33435 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Mmp13P33435 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.39■□□□□ 0.21
Mmp13P33435 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp13P33435 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mmp13P33435 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Mmp13P33435 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp13P33435 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp13P33435 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp13P33435 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp13P33435 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms