Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.21■□□□□ 0.03
Slc6a11P31650 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Slc6a11P31650 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.21■□□□□ 0.03
Slc6a11P31650 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.21■□□□□ 0.03
Slc6a11P31650 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a11P31650 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.21■□□□□ 0.03
Slc6a11P31650 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a11P31650 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a11P31650 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Slc6a11P31650 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc6a11P31650 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.2■□□□□ 0.02
Slc6a11P31650 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.2■□□□□ 0.02
Slc6a11P31650 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a11P31650 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a11P31650 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.19■□□□□ 0.02
Slc6a11P31650 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc6a11P31650 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Gm29518-201ENSMUST00000190858 372 ntBASIC15.19■□□□□ 0.02
Slc6a11P31650 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.19■□□□□ 0.02
Slc6a11P31650 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Slc6a11P31650 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a11P31650 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Slc6a11P31650 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Mir1668-201ENSMUST00000184114 107 ntBASIC15.18■□□□□ 0.02
Slc6a11P31650 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.18■□□□□ 0.02
Slc6a11P31650 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a11P31650 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms