Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Slc6a13P31649 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Slc6a13P31649 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Slc6a13P31649 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a13P31649 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Slc6a13P31649 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.24■□□□□ 0.19
Slc6a13P31649 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc6a13P31649 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Slc6a13P31649 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Gm12895-201ENSMUST00000122214 226 ntBASIC16.23■□□□□ 0.19
Slc6a13P31649 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.23■□□□□ 0.19
Slc6a13P31649 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Slc6a13P31649 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.23■□□□□ 0.19
Slc6a13P31649 Gm28033-201ENSMUST00000184224 96 ntBASIC16.23■□□□□ 0.19
Slc6a13P31649 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.23■□□□□ 0.19
Slc6a13P31649 Gm18669-201ENSMUST00000216049 778 ntBASIC16.23■□□□□ 0.19
Slc6a13P31649 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Slc6a13P31649 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a13P31649 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Slc6a13P31649 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Slc6a13P31649 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Slc6a13P31649 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.22■□□□□ 0.19
Slc6a13P31649 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.22■□□□□ 0.19
Slc6a13P31649 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.22■□□□□ 0.19
Slc6a13P31649 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.22■□□□□ 0.19
Slc6a13P31649 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.22■□□□□ 0.19
Slc6a13P31649 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.22■□□□□ 0.19
Slc6a13P31649 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.22■□□□□ 0.19
Slc6a13P31649 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.22■□□□□ 0.19
Slc6a13P31649 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Slc6a13P31649 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a13P31649 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.21■□□□□ 0.19
Slc6a13P31649 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slc6a13P31649 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a13P31649 Gm15165-201ENSMUST00000118140 502 ntBASIC16.21■□□□□ 0.19
Slc6a13P31649 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.21■□□□□ 0.19
Slc6a13P31649 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Slc6a13P31649 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms