Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.9□□□□□ -0.02
Nedd8P29595 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nedd8P29595 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nedd8P29595 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.89□□□□□ -0.03
Nedd8P29595 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Nedd8P29595 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.89□□□□□ -0.03
Nedd8P29595 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nedd8P29595 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.89□□□□□ -0.03
Nedd8P29595 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.89□□□□□ -0.03
Nedd8P29595 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.89□□□□□ -0.03
Nedd8P29595 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nedd8P29595 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nedd8P29595 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.88□□□□□ -0.03
Nedd8P29595 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.88□□□□□ -0.03
Nedd8P29595 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.88□□□□□ -0.03
Nedd8P29595 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.88□□□□□ -0.03
Nedd8P29595 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.88□□□□□ -0.03
Nedd8P29595 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nedd8P29595 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.87□□□□□ -0.03
Nedd8P29595 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nedd8P29595 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nedd8P29595 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 BC037039-201ENSMUST00000192003 2205 ntBASIC14.87□□□□□ -0.03
Nedd8P29595 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.87□□□□□ -0.03
Nedd8P29595 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Nedd8P29595 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Gm5408-201ENSMUST00000197998 747 ntBASIC14.87□□□□□ -0.03
Nedd8P29595 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.87□□□□□ -0.03
Nedd8P29595 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nedd8P29595 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Nedd8P29595 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nedd8P29595 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nedd8P29595 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nedd8P29595 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nedd8P29595 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.86□□□□□ -0.03
Nedd8P29595 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.86□□□□□ -0.03
Nedd8P29595 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nedd8P29595 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms