Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm23935-201ENSMUST00000102303 57 ntBASIC18.35■□□□□ 0.53
Vcam1P29533 Gm24270-201ENSMUST00000102326 57 ntBASIC18.35■□□□□ 0.53
Vcam1P29533 Gm24245-201ENSMUST00000157318 57 ntBASIC18.35■□□□□ 0.53
Vcam1P29533 Gm25925-201ENSMUST00000158314 306 ntBASIC18.35■□□□□ 0.53
Vcam1P29533 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.35■□□□□ 0.53
Vcam1P29533 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Vcam1P29533 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vcam1P29533 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Vcam1P29533 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Mir3113-201ENSMUST00000175478 76 ntBASIC18.34■□□□□ 0.53
Vcam1P29533 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.34■□□□□ 0.53
Vcam1P29533 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.34■□□□□ 0.53
Vcam1P29533 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vcam1P29533 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Vcam1P29533 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcam1P29533 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vcam1P29533 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vcam1P29533 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vcam1P29533 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vcam1P29533 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.33■□□□□ 0.52
Vcam1P29533 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.33■□□□□ 0.52
Vcam1P29533 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Gm6736-201ENSMUST00000166583 948 ntBASIC18.33■□□□□ 0.52
Vcam1P29533 Gm2756-201ENSMUST00000195851 400 ntBASIC18.33■□□□□ 0.52
Vcam1P29533 Gm9682-201ENSMUST00000197505 556 ntBASIC18.33■□□□□ 0.52
Vcam1P29533 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.33■□□□□ 0.52
Vcam1P29533 Haglr-201ENSMUST00000100000 2085 ntBASIC18.33■□□□□ 0.52
Vcam1P29533 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vcam1P29533 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.32■□□□□ 0.52
Vcam1P29533 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vcam1P29533 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.32■□□□□ 0.52
Vcam1P29533 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vcam1P29533 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Vcam1P29533 Gm14822-201ENSMUST00000122247 291 ntBASIC18.32■□□□□ 0.52
Vcam1P29533 Gm24513-201ENSMUST00000174964 138 ntBASIC18.32■□□□□ 0.52
Vcam1P29533 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Mir8117-201ENSMUST00000184773 107 ntBASIC18.32■□□□□ 0.52
Vcam1P29533 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.32■□□□□ 0.52
Vcam1P29533 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.32■□□□□ 0.52
Vcam1P29533 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vcam1P29533 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.32■□□□□ 0.52
Vcam1P29533 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Vcam1P29533 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Vcam1P29533 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vcam1P29533 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vcam1P29533 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.32■□□□□ 0.52
Vcam1P29533 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vcam1P29533 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vcam1P29533 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.31■□□□□ 0.52
Vcam1P29533 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.31■□□□□ 0.52
Vcam1P29533 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vcam1P29533 Gm27397-201ENSMUST00000184997 107 ntBASIC18.31■□□□□ 0.52
Vcam1P29533 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.31■□□□□ 0.52
Vcam1P29533 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.31■□□□□ 0.52
Vcam1P29533 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.31■□□□□ 0.52
Vcam1P29533 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vcam1P29533 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms