Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl6P27784 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl6P27784 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl6P27784 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.51□□□□□ -0.41
Ccl6P27784 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccl6P27784 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.51□□□□□ -0.41
Ccl6P27784 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccl6P27784 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccl6P27784 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl6P27784 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Ccl6P27784 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccl6P27784 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl6P27784 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.51□□□□□ -0.41
Ccl6P27784 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccl6P27784 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ccl6P27784 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccl6P27784 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccl6P27784 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccl6P27784 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccl6P27784 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccl6P27784 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccl6P27784 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccl6P27784 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.49□□□□□ -0.41
Ccl6P27784 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccl6P27784 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccl6P27784 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.49□□□□□ -0.41
Ccl6P27784 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccl6P27784 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccl6P27784 Gm6623-201ENSMUST00000173570 544 ntBASIC12.49□□□□□ -0.41
Ccl6P27784 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccl6P27784 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.49□□□□□ -0.41
Ccl6P27784 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms