Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.76□□□□□ -0.05
Cd40lgP27548 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.76□□□□□ -0.05
Cd40lgP27548 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cd40lgP27548 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cd40lgP27548 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cd40lgP27548 Gm10052-201ENSMUST00000168019 960 ntBASIC14.76□□□□□ -0.05
Cd40lgP27548 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cd40lgP27548 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Gm7729-201ENSMUST00000050143 801 ntBASIC14.76□□□□□ -0.05
Cd40lgP27548 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cd40lgP27548 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cd40lgP27548 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.75□□□□□ -0.05
Cd40lgP27548 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.75□□□□□ -0.05
Cd40lgP27548 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.75□□□□□ -0.05
Cd40lgP27548 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Gm27742-201ENSMUST00000184667 60 ntBASIC14.75□□□□□ -0.05
Cd40lgP27548 Gm17807-201ENSMUST00000186869 298 ntBASIC14.75□□□□□ -0.05
Cd40lgP27548 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.75□□□□□ -0.05
Cd40lgP27548 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40lgP27548 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40lgP27548 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.74□□□□□ -0.05
Cd40lgP27548 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cd40lgP27548 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.73□□□□□ -0.05
Cd40lgP27548 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cd40lgP27548 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cd40lgP27548 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.73□□□□□ -0.05
Cd40lgP27548 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.73□□□□□ -0.05
Cd40lgP27548 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cd40lgP27548 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.73□□□□□ -0.05
Cd40lgP27548 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.73□□□□□ -0.05
Cd40lgP27548 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40lgP27548 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms