Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col8a2P25318 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.35□□□□□ -0.27
Col8a2P25318 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.35□□□□□ -0.27
Col8a2P25318 Gm6376-201ENSMUST00000209407 580 ntBASIC13.35□□□□□ -0.27
Col8a2P25318 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Col8a2P25318 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col8a2P25318 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col8a2P25318 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.35□□□□□ -0.27
Col8a2P25318 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col8a2P25318 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col8a2P25318 Gm4459-201ENSMUST00000118750 468 ntBASIC13.34□□□□□ -0.27
Col8a2P25318 Gm13418-201ENSMUST00000119097 944 ntBASIC13.34□□□□□ -0.27
Col8a2P25318 Gm44771-201ENSMUST00000206975 626 ntBASIC13.34□□□□□ -0.27
Col8a2P25318 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col8a2P25318 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.34□□□□□ -0.27
Col8a2P25318 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col8a2P25318 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.34□□□□□ -0.27
Col8a2P25318 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col8a2P25318 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Col8a2P25318 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a2P25318 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.33□□□□□ -0.27
Col8a2P25318 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.33□□□□□ -0.27
Col8a2P25318 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a2P25318 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col8a2P25318 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Col8a2P25318 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col8a2P25318 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.33□□□□□ -0.28
Col8a2P25318 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.33□□□□□ -0.28
Col8a2P25318 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.33□□□□□ -0.28
Col8a2P25318 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.33□□□□□ -0.28
Col8a2P25318 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.33□□□□□ -0.28
Col8a2P25318 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.33□□□□□ -0.28
Col8a2P25318 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col8a2P25318 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col8a2P25318 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms