Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aldh1a1P24549 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aldh1a1P24549 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aldh1a1P24549 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aldh1a1P24549 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aldh1a1P24549 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Aldh1a1P24549 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.12■□□□□ 0.33
Aldh1a1P24549 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 AA543401-201ENSMUST00000164248 1269 ntBASIC17.12■□□□□ 0.33
Aldh1a1P24549 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Aldh1a1P24549 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.12■□□□□ 0.33
Aldh1a1P24549 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Gm9682-201ENSMUST00000197505 556 ntBASIC17.11■□□□□ 0.33
Aldh1a1P24549 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.11■□□□□ 0.33
Aldh1a1P24549 Gm5312-201ENSMUST00000203728 547 ntBASIC17.11■□□□□ 0.33
Aldh1a1P24549 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Aldh1a1P24549 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Gm27301-201ENSMUST00000184012 127 ntBASIC17.1■□□□□ 0.33
Aldh1a1P24549 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.1■□□□□ 0.33
Aldh1a1P24549 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.1■□□□□ 0.33
Aldh1a1P24549 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.1■□□□□ 0.33
Aldh1a1P24549 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Aldh1a1P24549 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.09■□□□□ 0.33
Aldh1a1P24549 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aldh1a1P24549 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms