Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Cbx3P23198 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.64□□□□□ -0.07
Cbx3P23198 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cbx3P23198 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.64□□□□□ -0.07
Cbx3P23198 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.63□□□□□ -0.07
Cbx3P23198 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
Cbx3P23198 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.63□□□□□ -0.07
Cbx3P23198 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cbx3P23198 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cbx3P23198 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cbx3P23198 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cbx3P23198 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.62□□□□□ -0.07
Cbx3P23198 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cbx3P23198 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cbx3P23198 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.62□□□□□ -0.07
Cbx3P23198 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.62□□□□□ -0.07
Cbx3P23198 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cbx3P23198 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.62□□□□□ -0.07
Cbx3P23198 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cbx3P23198 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.62□□□□□ -0.07
Cbx3P23198 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cbx3P23198 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.61□□□□□ -0.07
Cbx3P23198 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.61□□□□□ -0.07
Cbx3P23198 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.61□□□□□ -0.07
Cbx3P23198 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cbx3P23198 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Cbx3P23198 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms