Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prim1P20664 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prim1P20664 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.3■□□□□ 0.84
Prim1P20664 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prim1P20664 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Prim1P20664 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.3■□□□□ 0.84
Prim1P20664 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Gm11779-201ENSMUST00000118541 368 ntBASIC20.3■□□□□ 0.84
Prim1P20664 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.3■□□□□ 0.84
Prim1P20664 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.3■□□□□ 0.84
Prim1P20664 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prim1P20664 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prim1P20664 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prim1P20664 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Prim1P20664 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prim1P20664 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.29■□□□□ 0.84
Prim1P20664 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Prim1P20664 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Prim1P20664 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prim1P20664 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Prim1P20664 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Prim1P20664 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.28■□□□□ 0.84
Prim1P20664 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Prim1P20664 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.28■□□□□ 0.84
Prim1P20664 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.28■□□□□ 0.84
Prim1P20664 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.28■□□□□ 0.84
Prim1P20664 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prim1P20664 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Prim1P20664 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Prim1P20664 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Gm7222-201ENSMUST00000117512 906 ntBASIC20.27■□□□□ 0.84
Prim1P20664 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.27■□□□□ 0.84
Prim1P20664 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prim1P20664 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.27■□□□□ 0.84
Prim1P20664 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.27■□□□□ 0.84
Prim1P20664 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prim1P20664 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.27■□□□□ 0.83
Prim1P20664 Haglr-201ENSMUST00000100000 2085 ntBASIC20.26■□□□□ 0.83
Prim1P20664 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim1P20664 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim1P20664 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Prim1P20664 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Prim1P20664 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Prim1P20664 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.26■□□□□ 0.83
Prim1P20664 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim1P20664 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim1P20664 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prim1P20664 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prim1P20664 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim1P20664 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim1P20664 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim1P20664 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.25■□□□□ 0.83
Prim1P20664 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Prim1P20664 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms