Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf9P20334 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Gm11336-201ENSMUST00000118168 334 ntBASIC13.05□□□□□ -0.32
Tnfrsf9P20334 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf9P20334 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Mir5131-201ENSMUST00000175426 93 ntBASIC13.04□□□□□ -0.32
Tnfrsf9P20334 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf9P20334 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Gm1401-201ENSMUST00000122048 772 ntBASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms