Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.97□□□□□ -0.33
Cdx1P18111 Odf3b-204ENSMUST00000227834 930 ntBASIC12.97□□□□□ -0.33
Cdx1P18111 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdx1P18111 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdx1P18111 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Cdx1P18111 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.97□□□□□ -0.33
Cdx1P18111 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdx1P18111 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.97□□□□□ -0.33
Cdx1P18111 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdx1P18111 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx1P18111 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdx1P18111 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.96□□□□□ -0.33
Cdx1P18111 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Gm10231-201ENSMUST00000181584 441 ntBASIC12.96□□□□□ -0.33
Cdx1P18111 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdx1P18111 Gm10175-202ENSMUST00000208752 441 ntBASIC12.96□□□□□ -0.33
Cdx1P18111 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.96□□□□□ -0.33
Cdx1P18111 Gm30025-201ENSMUST00000218555 728 ntBASIC12.96□□□□□ -0.33
Cdx1P18111 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx1P18111 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Cdx1P18111 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cdx1P18111 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx1P18111 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx1P18111 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx1P18111 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx1P18111 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.96□□□□□ -0.34
Cdx1P18111 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.96□□□□□ -0.34
Cdx1P18111 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx1P18111 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdx1P18111 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx1P18111 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.95□□□□□ -0.34
Cdx1P18111 Gm42545-201ENSMUST00000202755 922 ntBASIC12.95□□□□□ -0.34
Cdx1P18111 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.95□□□□□ -0.34
Cdx1P18111 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx1P18111 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx1P18111 Timm23-208ENSMUST00000226683 750 ntBASIC12.95□□□□□ -0.34
Cdx1P18111 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdx1P18111 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cdx1P18111 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx1P18111 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdx1P18111 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdx1P18111 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdx1P18111 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdx1P18111 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx1P18111 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms