Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd44P15379 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.83■□□□□ 0.28
Cd44P15379 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.83■□□□□ 0.28
Cd44P15379 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cd44P15379 BC037039-201ENSMUST00000192003 2205 ntBASIC16.83■□□□□ 0.28
Cd44P15379 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.83■□□□□ 0.28
Cd44P15379 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.83■□□□□ 0.28
Cd44P15379 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd44P15379 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd44P15379 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd44P15379 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd44P15379 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cd44P15379 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd44P15379 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.83■□□□□ 0.28
Cd44P15379 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd44P15379 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cd44P15379 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cd44P15379 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cd44P15379 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd44P15379 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.82■□□□□ 0.28
Cd44P15379 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd44P15379 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cd44P15379 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd44P15379 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cd44P15379 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.81■□□□□ 0.28
Cd44P15379 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.81■□□□□ 0.28
Cd44P15379 Gm43799-201ENSMUST00000201845 579 ntBASIC16.81■□□□□ 0.28
Cd44P15379 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.81■□□□□ 0.28
Cd44P15379 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Cd44P15379 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.81■□□□□ 0.28
Cd44P15379 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.81■□□□□ 0.28
Cd44P15379 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Cd44P15379 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd44P15379 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cd44P15379 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cd44P15379 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd44P15379 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Cd44P15379 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cd44P15379 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cd44P15379 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.8■□□□□ 0.28
Cd44P15379 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.8■□□□□ 0.28
Cd44P15379 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd44P15379 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Gm37722-201ENSMUST00000193757 208 ntBASIC16.8■□□□□ 0.28
Cd44P15379 Gm45058-201ENSMUST00000205810 766 ntBASIC16.8■□□□□ 0.28
Cd44P15379 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.8■□□□□ 0.28
Cd44P15379 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Cd44P15379 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cd44P15379 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd44P15379 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd44P15379 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cd44P15379 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd44P15379 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd44P15379 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd44P15379 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd44P15379 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd44P15379 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cd44P15379 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms