Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nid1P10493 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.02■□□□□ -0
Nid1P10493 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nid1P10493 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.02■□□□□ -0
Nid1P10493 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Nid1P10493 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.02■□□□□ -0
Nid1P10493 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.02■□□□□ -0
Nid1P10493 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nid1P10493 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.02■□□□□ -0
Nid1P10493 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nid1P10493 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nid1P10493 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.01□□□□□ -0.01
Nid1P10493 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nid1P10493 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Gm6623-201ENSMUST00000173570 544 ntBASIC15.01□□□□□ -0.01
Nid1P10493 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nid1P10493 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.01□□□□□ -0.01
Nid1P10493 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 App-207ENSMUST00000227737 2827 ntBASIC15.01□□□□□ -0.01
Nid1P10493 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.01□□□□□ -0.01
Nid1P10493 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nid1P10493 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Nid1P10493 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15□□□□□ -0.01
Nid1P10493 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15□□□□□ -0.01
Nid1P10493 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15□□□□□ -0.01
Nid1P10493 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nid1P10493 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nid1P10493 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nid1P10493 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15□□□□□ -0.01
Nid1P10493 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nid1P10493 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nid1P10493 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nid1P10493 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nid1P10493 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms