Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl1P10146 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccl1P10146 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Gm37025-201ENSMUST00000195159 829 ntBASIC12.48□□□□□ -0.41
Ccl1P10146 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Ccl1P10146 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl1P10146 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccl1P10146 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccl1P10146 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Gm42545-201ENSMUST00000202755 922 ntBASIC12.47□□□□□ -0.41
Ccl1P10146 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccl1P10146 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccl1P10146 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Ccl1P10146 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl1P10146 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccl1P10146 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccl1P10146 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Ccl1P10146 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccl1P10146 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ccl1P10146 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Gm2559-201ENSMUST00000201323 363 ntBASIC12.46□□□□□ -0.41
Ccl1P10146 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.46□□□□□ -0.41
Ccl1P10146 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl1P10146 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccl1P10146 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Ccl1P10146 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl1P10146 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccl1P10146 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl1P10146 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms